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InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor This publication appears in: Genome Biology Authors: A. Coletta, C. Molter, R. Duqué, D. Frederik Steenhoff, J. Taminau, V. De Schaetzen Van Brienen, S. Meganck, V. Cosmin Lazar, D. Venet, V. Detours, A. Nowé, H. Bersini and D. Y. Weiss-Solis Volume: 13 Issue: 11 Number of Pages: 13 Publication Year: 2012
Abstract: Genomics datasets are increasingly useful for gaining biomedical insights, with adoption in the clinic underway. However, multiple hurdles related to data management stand in the way of their efficient large-scale utilization. The solution proposed is a web-based data storage hub. Having clear focus, flexibility and adaptability, InSilico DB seamlessly connects genomics dataset repositories to state-of-the-art and free GUI and command-line data analysis tools. The InSilico DB platform is a powerful collaborative environment, with advanced capabilities for biocuration, dataset sharing, and dataset subsetting and combination. InSilico DB is available from https://insilicodb.org.
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